Publications from the NMR Facility
 
 

 

2009

2008

2007

  • Jastrzebska, I., Scaglione, J.B., DeKoster, G.T., Rath, R.P. and Covey, D.F. Palladium-Catalyzed Potassium Enoxyborate Alkylation of Enantiopure Hajos-Parrish Indenone to Construct Rearranged Steroid Ring Systems. J. Org. Chem. 72:4837-4843 (2007).

2006

  • Lu, J., Cistola, D.P. and Li, E. Analysis of ligand binding and protein dynamics of human retinoid X receptor alpha ligand-binding doman by nuclear magnetice resonance. Biochemistry 45:1629-1639 (2006).
  • Anderson, M.A., Ogbay, B., Arimoto, R., Sha, W., Kisselev, O.G. Cistola, D.P. and Marshall, G.R. Relative strength of cation-pi vs salt bridge interactions: The GTalpha(340-350) peptide/rhodopsin system. JACS 128:7531-7541 (2006).
  • Scaglione, J.B., Manion, B.D., Benz, A., Taylor, A., DeKoster, G.T., Rath, N.P., Evers, A.S., Zorumski, C.F., Mennerick, S., and Covey, D.F. Neurosteroid Analogues. 11. Alternative Ring System Scaffolds: Aminobutyric Acid Receptor Modulation and Anesthetic Actions of Benz[f]indenes. J. Med. Chem. 49:4595-4605 (2006).
  • Orsolya T., Monsey, J.D., DeKoster, G.T., Tochtrop, G.P., Tang, C., and Cistola, D.P. Determinants of Cooperativity and Site-Selectivity in Human Ileal Bile Acid Binding Protein. Biochemistry 45:727-37 (2006).

2005

  • Showalter, S.A. and Hall, K.B. Isotropic Reorientational Egenmode Dynamics Complements NMR Relaxation Measurements for RNA. Methods in Enzymology 394:465-480 (2005).
  • Showalter, S.A., Baker, N.A., Tang, C. and Hall, K.B. Iron Responsive Element RNA Flexibility Described by NMR and Isotropic Reorientational Egenmode Dynamics. Journal of Biomolecular NMR 32:179-193 (2005).
  • Li, H. and Frieden, C. Phenylalanine side chain behavior of the intestinal fatty acid binding protein: The effect of urea on backbone and side chain stability. J Biol Chem 280:38556-61(2005).
  • Shu, Q. and Frieden, C. Relation of enzyme activity of local/global stability of murine adenosine deaminase: 19F NMR studies. J Mol Biol 345:599-610 (2005).
  • Li, H. and Frieden, C. NMR studies of 4-(19)F-phenylalanine-labeled intestinal fatty acid binding protein: Evidence of conformational heterogeneity in the native state. Biochem 44:2369-2377 (2005).

2004

2003

  • Liu, W. Zheng, Y., Cistola, D.P. and Yang, D. Measurement of methyl 13C-1H cross-correlation in uniformly 13C-, 15N-, labeled proteins. Journal of Biomolecular NMR 27:351-364 (2003).
  • Lu, J., Cistola, D.P. and Li, E. Two homologous rat cellular retinol-binding proteins differ in local conformational flexibility. J Mol Biol 330:799-812 (2003).

2002

  • Michalski, M.L., Monsey, J.D., Cistola, D.P. and Weil, G.J. An embryo-associated fatty acid-binding protein in the filarial nematode Brugia malayi. Mol. Biochem. Parasitology 124:1-10 (2002).
  • Tochtrop, G.P., DeKoster, G.T., Cistola, D.P. and Covey, D.F. Synthesis of [3,4-(13)c(2)]-enriched bile salts as NMR probes of protein-ligand interactions. J Organic Chem. 67:6764-6771 (2002).
  • Tochtrop, G.P., DeKoster, G.T., Cistola, D.P. and Covey, D.F. A Simple Efficient Synthesis of [23,24]-13C(2)-Labeled Bile Salts as NMR Probes of Protein-Ligand Interactions. Bioorganic & Medicinal Chemistry Letters 12:433-435 (2002).
  • Tochtrop, G.P. Richter, K., Tang, C., Toner, J.J., Covey, D.F. and Cistola, D.P. Energetics by NMR: Site-specific binding in a positively cooperative system. Proceedings of the National Academy of Sciences of the United States of America 99:1847-52 (2002).
  • Bann, J.G., Pinkner, J., Hultgren, S.J. and Frieden, C. Real-time and equilibrium 19F-NMR studies reveal the role of domain-domain interactions in the folding of the chaperone PapD. Proc. Nat'l Acad Sci. 99:709-714 (2002).
  • Showalter, S.A. and Hall, K.B. A functional role for correlated motion in the N-terminal RNA-binding domain of human U1A protein. J Mol Biol 322:533-542 (2002).
  • Hall, K.B. RNA-protein interactions. Current Opinion in Structural Biology 12:282-288 (2002).

2000

  • Lu, J., Lin, C.-L., Tang, C., Ponder, J. W., Kao, J. L. F., Cistola, D. P. and Li, E. Binding of retinal induces changes in rat cellular retinal-binding protein II conformation and backbone dynamics. J. Mol. Biol. 300:619-632 (2000).