Category: All Publications

The unstructured C-terminal tail of yeast Dpb11 (human TopBP1) protein is dispensable for DNA replication and the S phase checkpoint but required for the G2/M checkpoint.

Navadgi-Patil, V.M., Kumar, S. and Burgers, P.M.
The unstructured C-terminal tail of yeast Dpb11 (human TopBP1) protein is dispensable for DNA replication and the S phase checkpoint but required for the G2/M checkpoint.
J Biol Chem 286:40999-41007 (2011). (Abstract)

Mass spectrometry-based protein footprinting characterizes the structures of oligomeric apolipoprotein E2, E3, and E4.

Gau B.C., Garai K., Frieden C., & Gross M.L. (2011). “Mass spectrometry-based protein footprinting characterizes the structures of oligomeric apolipoprotein E2, E3, and E4.” Biochemistry. 2011 Sep 27;50(38):8117-26. doi: 10.1021/bi200911c. Epub 2011 Sep 2. (Abstract)

Diffusion of MMPs on the surface of collagen fibrils: the mobile cell surface-collagen substratum interface.

Collier I.E., Legant W., Marmer B., Lubman O., Saffarian S., Wakatsuki T., Elson E., & Goldberg G.I. (2011). “Diffusion of MMPs on the surface of collagen fibrils: the mobile cell surface-collagen substratum interface.” PLoS One. 2011;6(9):e24029. doi: 10.1371/journal.pone.0024029. Epub 2011 Sep 1. (Abstract)

Drug-like leads for steric discrimination between substrate and inhibitors of human acetylcholinesterase.

Wildman S.A., Zheng X., Sept D., Auletta J.T., Rosenberry T.L., and Marshall G.R. (2011) “Drug-like leads for steric discrimination between substrate and inhibitors of human acetylcholinesterase.” Chem Biol Drug Des. 2011 Oct;78(4):495-504. doi: 10.1111/j.1747-0285.2011.01157.x. Epub 2011 Aug 22. (Abstract)

Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding.

Jia H., Korolev S., Niedziela-Majka A., Maluf N.K., Gauss G.H., Myong S., Ha T., Waksman G., & Lohman T.M. (2011). “Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding.” J Mol Biol. 2011 Aug 19;411(3):633-48. doi: 10.1016/j.jmb.2011.06.019. Epub 2011 Jun 17. (Abstract)

Difference between restoring and predicting 3D structures of the loops in G-protein-coupled receptors by molecular modeling.

Nikiforovich G.V., Taylor C.M., Marshall G.R., and Baranski T.J. (2011) “Difference between restoring and predicting 3D structures of the loops in G-protein-coupled receptors by molecular modeling.” Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):E341; author reply E342. doi: 10.1073/pnas.1107702108. Epub 2011 Jul 1. (Abstract)