Author: Nicholas Caito
Parallel analysis of ribonucleotide-dependent deletions produced by yeast Top1 in vitro and in vivo.
Cho J.E., Huang S.N., Burgers P.M., Shuman S., Pommier Y., & Jinks-Robertson S. (2016). “Parallel analysis of ribonucleotide-dependent deletions produced by yeast Top1 in vitro and in vivo.” Nucleic Acids Res. 2016 Sep 19;44(16):7714-21. doi: 10.1093/nar/gkw495. Epub 2016 Jun 1. (Abstract)
May 27th, 2016
2016-05-27 – Nicholas Bodmer (Havranek Lab) – Creating a Molecular Toolkit for Next-Generation Protein Sequencing
Proficient Replication of the Yeast Genome by a Viral DNA Polymerase.
Stodola J.L., Stith C.M., & Burgers P.M. (2016). “Proficient Replication of the Yeast Genome by a Viral DNA Polymerase.” J Biol Chem. 2016 May 27;291(22):11698-705. doi: 10.1074/jbc.M116.728741. Epub 2016 Apr 12. (Abstract)
CAREER: FAST methods for protein folding and design
May 27th, 2016 – Gregory Bowman, PhD, assistant professor of biochemistry and molecular biophysics received a new five year grant award from the National Science Foundation for his research entitled “CAREER: FAST methods for protein folding and design”.
Resolving individual steps of Okazaki-fragment maturation at a millisecond timescale.
Stodola J.L. & Burgers P.M. (2016). “Resolving individual steps of Okazaki-fragment maturation at a millisecond timescale.” Nat Struct Mol Biol. 2016 May;23(5):402-8. doi: 10.1038/nsmb.3207. Epub 2016 Apr 11. (Abstract)
The 2016 Workshop on Kinetics and Markov State Models (MSMs) in Drug Design
May 20th, 2016 – Gregory Bowman, PhD, assistant professor of biochemistry and molecular biophysics received a BWF Ad Hoc grant in support of a workshop entitled “The 2016 Workshop on Kinetics and Markov State Models (MSMs) in Drug Design” held on May 19-20 at the Novartis Institutes for Biomedical Research in Cambridge, Massachusetts.
Chemo-mechanical pushing of proteins along single-stranded DNA.
Sokoloski J.E., Kozlov A.G., Galletto R., & Lohman T.M. (2016). “Chemo-mechanical pushing of proteins along single-stranded DNA.” Proc Natl Acad Sci U S A. 2016 May 31;113(22):6194-9. doi: 10.1073/pnas.1602878113. Epub 2016 May 16. (Abstract)
Defining Single Molecular Forces Required for Notch Activation Using Nano Yoyo.
Chowdhury F., Li I., Ngo T., Leslie B., Kim B., Sokoloski J., Weiland E., Wang X., Chemla Y., Lohman T., & Ha T. (2016). “Defining Single Molecular Forces Required for Notch Activation Using Nano Yoyo.” Nano Lett. 2016 Jun 8;16(6):3892-7. doi: 10.1021/acs.nanolett.6b01403. Epub 2016 May 12. (Abstract)