Spectroscopic probes of RNA structure and dynamics.
Hall K.B. (2012). “Spectroscopic probes of RNA structure and dynamics.” Methods Mol Biol. 2012;875:67-84. doi: 10.1007/978-1-61779-806-1_4. (Abstract)
Author: Nicholas Caito
Fluorescence methods to study DNA translocation and unwinding kinetics by nucleic acid motors.
Fischer C.J., Tomko E.J., Wu C.G., & Lohman T.M. (2012). “Fluorescence methods to study DNA translocation and unwinding kinetics by nucleic acid motors.” Methods Mol Biol. 2012;875:85-104. doi: 10.1007/978-1-61779-806-1_5. (Abstract)
Single-molecule views of protein movement on single-stranded DNA.
Ha T., Kozlov A.G., & Lohman T.M. (2012). “Single-molecule views of protein movement on single-stranded DNA.” Annu Rev Biophys. 2012;41:295-319. doi: 10.1146/annurev-biophys-042910-155351. Epub 2012 Feb 23. (Abstract)
Negative co-operativity in the EGF receptor.
Pike L.J. (2012). “Negative co-operativity in the EGF receptor.” Biochem Soc Trans. 2012 Feb;40(1):15-9. doi: 10.1042/BST20110610. (Abstract)
Automated selection of stabilizing mutations in designed and natural proteins.
Borgo B. and Havranek J.J. (2012) “Automated selection of stabilizing mutations in designed and natural proteins.” Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):1494-9. doi: 10.1073/pnas.1115172109. Epub 2012 Jan 17. (Abstract)
Millisecond time-scale folding and unfolding of DNA hairpins using rapid-mixing stopped-flow kinetics.
Nayak R.K., Peersen O.B., Hall K.B., & Van Orden A. (2012). “Millisecond time-scale folding and unfolding of DNA hairpins using rapid-mixing stopped-flow kinetics.” J Am Chem Soc. 2012 Feb 8;134(5):2453-6. doi: 10.1021/ja208490w. Epub 2012 Jan 30. (Abstract)
RNase H and postreplication repair protect cells from ribonucleotides incorporated in DNA.
Lazzaro, F., Novarina, D., Amara, F., Watt, D.L., Stone, J.E., Costanzo, V., Burgers, P.M., Kunkel, T.A., Plevani, P. and Mulzi-Falconi, M.
RNase H and postreplication repair protect cells from ribonucleotides incorporated in DNA.
Mol Cell. 45:99-110 (2012). (Abstract)
Mechanics of EGF receptor/ErbB2 kinase activation revealed by luciferase fragment complementation imaging.
Macdonald-Obermann J.L, Piwnica-Worms D., & Pike L.J. (2012). “Mechanics of EGF receptor/ErbB2 kinase activation revealed by luciferase fragment complementation imaging.” Proc Natl Acad Sci U S A. 2012 Jan 3;109(1):137-42. doi: 10.1073/pnas.1111316109. Epub 2011 Dec 21. (Abstract)
Limiting assumptions in structure-based design: binding entropy.
Marshall G.R. (2012) “Limiting assumptions in structure-based design: binding entropy.” J Comput Aided Mol Des. 2012 Jan;26(1):3-8. doi: 10.1007/s10822-011-9494-1. Epub 2012 Jan 3. (Abstract)
The membrane-proximal intracellular domain of the epidermal growth factor receptor underlies negative cooperativity in ligand binding.
Adak S., Yang K.S., Macdonald-Obermann J., & Pike L.J. (2011). “The membrane-proximal intracellular domain of the epidermal growth factor receptor underlies negative cooperativity in ligand binding.” J Biol Chem. 2011 Dec 30;286(52):45146-55. doi: 10.1074/jbc.M111.274175. Epub 2011 Nov 8. (Abstract)