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Discovery of multiple hidden allosteric sites by combining Markov state models and experiments
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Wu E.Y., Walsh A.R., Materne E.C., Hiltner E.P., Zielinski B., Miller B.R. 3rd, Mawby L., Modeste E., Parish C.A., Barnes W.M., & Kermekchiev M.B. (2015). “A conservative isoleucine to leucine mutation causes major rearrangements and cold sensitivity in KlenTaq1 DNA polymerase.” Biochemistry. 2015 Jan 27;54(3):881-9. doi: 10.1021/bi501198f. Epub 2015 Jan 9. (Abstract)
Rohit Pappu – 2015-01-13 – Form & Functions of Intrinsically Disordered Proteins Inferred from Physical Principles
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The DNA-binding domain of yeast Rap1 interacts with double-stranded DNA in multiple binding modes.
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Liu C., Ponder J.W., and Marshall G.R. (2014) “Helix stability of oligoglycine, oligoalanine, and oligo-β-alanine dodecamers reflected by hydrogen-bond persistence.” Proteins. 2014 Nov;82(11):3043-61. doi: 10.1002/prot.24665. Epub 2014 Sep 20. (Abstract)
Han Z., Harris P.K., Jones D.E., Chugani R., Kim T., Agarwal M., Shen W., Wildman S.A., & Janetka J.W. (2014). “Inhibitors of HGFA, Matriptase, and Hepsin Serine Proteases: A Nonkinase Strategy to Block Cell Signaling in Cancer.” ACS Med Chem Lett. 2014 Oct 9;5(11):1219-24. doi: 10.1021/ml500254r. eCollection 2014 Nov 13. (Abstract)